Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891408.1_cds_XP_016446194.1_41077
CDS Infomation

[gene=LOC107771359] [db_xref=GeneID:107771359] [protein=pentatricopeptide repeat-containing protein At2g15980-like] [protein_id=XP_016446194.1] [location=complement(34508..35974)] [gbkey=CDS]
Sequence

ATGGCGATGATATCAACTATTACAAGACGCATTATTTTCTCAACCTCATTAACCAAACAC
TCATCTTCCTCTTCCTTCTTCTCTTGTACCTCACCTCAACCATCTTCAAGCGAAGACGAA
ACTTTAGTCTCAACAGCCATAACAATCCTCAAACACCATCGCTCAAAATCAAGATGGTCC
GAAATTCTTTCCCTATCTCCACCCCCTCCCGGATTCACTCCTTCCCAAGTCTCTCAAATC
ATTCTTCAACTCCGCAACACACCTCACCTCGCCCTCCGTTTCTTTCATTTCACGATCACT
CGCTCCATTTGCTCTCACTCTCTTTCTTCCTACGCCACTATCATTCACATCCTCTCCCGT
TCCCGCCTTAAATCTCAAGCTTTAGAGCTACTAAAATCCGCCATTCGAAAATTCCCTGAC
ACCCATCAACCTGATTTAACAAACCCACCTCGGATTTTCCAAATCTTGGTTAAAACTTAC
AGGACTTGTGATTCAGCTCCCTTTGTGTTTGATTTGTTGATTAGAGCTTATTTGGATTCT
AAAAAACTTGACCTTTCTGTTCAACTTGTGAGGATTTTAGCTAAAAAGAATATCTTTCCA
CATGTTGTTATATGCAATTCTTTGATTGAGTTGATTGCTAAAAGTCGAGGCCCTTTTGCT
GCTTATGATATGTATAGGGAAATTTTTAAAGGTAGAGAGGTAAAGGGTGTAATCGCAAAT
GCTTATACGTTTAACATTCTTATGGTTGCTTTTCATAGAGAAGGAGTAGTGGAGAAGGTT
GAGGAGGTTTGGAAGGAAATGATGGAAAAAAAATGTGTCCCGAATACATATAGTTATAGT
GTTTTAATGGCCGCTTATTGTGAGGATGGACTGATGGAGAATGCCATGAAAGTTTGGGAG
GAGATGGGTGATAAGGGCGTGAAACATGATATTGTAGCTTATAATACCATAATTGGGGGA
TTTTGTAAAGTTGGAGACGTTGAGAGAGCTGAGGAGGTTTTCAGGGAGATGGTTTTCGAT
GGGATGGAGTGTACATGTGTTACCCTTGAGCATCTGATAAATGGACATTGTATGAGTGGG
AATGTTGATGCAGCTCTGGTCTTGTATAAGGATATGTGTCGAAAGGGATTCAAACCAGAG
AGTTCAATGATAGATGATGTTGCTCGGATGCTATGCAACAAAAATGGAGTTTTTGAGGCC
TTGGTATTTGTGAGAGCTGTAATAAAGAAACATGATATCATACCAAGGAAGAGTACATAT
GAACTTCTGATACGGAACTTGTGTGAGGAGGGTTTGATGGAAGAAGCTCGAAAATTTCAG
GTGGAAATGGTGGGGAAAGGATTTGCACCAAATTTGGAAATATATAGTGCTTTCATTGAT
GGGTACGTCAAGCAAGGGAATGATGAAATGGCTGAAATTTTGAGGAACGAAATGCTTACG
AATAAGATCTCTTGTAAAGACAGCTAG

Peptide Sequence

PEP ID

XP_016446194.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g15980-like [Nicotiana tabacum]
Sequence

MAMISTITRRIIFSTSLTKHSSSSSFFSCTSPQPSSSEDETLVSTAITILKHHRSKSRWS
EILSLSPPPPGFTPSQVSQIILQLRNTPHLALRFFHFTITRSICSHSLSSYATIIHILSR
SRLKSQALELLKSAIRKFPDTHQPDLTNPPRIFQILVKTYRTCDSAPFVFDLLIRAYLDS
KKLDLSVQLVRILAKKNIFPHVVICNSLIELIAKSRGPFAAYDMYREIFKGREVKGVIAN
AYTFNILMVAFHREGVVEKVEEVWKEMMEKKCVPNTYSYSVLMAAYCEDGLMENAMKVWE
EMGDKGVKHDIVAYNTIIGGFCKVGDVERAEEVFREMVFDGMECTCVTLEHLINGHCMSG
NVDAALVLYKDMCRKGFKPESSMIDDVARMLCNKNGVFEALVFVRAVIKKHDIIPRKSTY
ELLIRNLCEEGLMEEARKFQVEMVGKGFAPNLEIYSAFIDGYVKQGNDEMAEILRNEMLT
NKISCKDS

Transcript Sequence

Gene sequence data has not been registered.